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Munguti, F.M., LaTourrette, K., Silva, G., Maina, S., Kilalo, D.C., Macharia, I., Mwango'mbe, A.W., Nyaboga, E.N., and Garcia-Ruiz, H. 2026. Metagenomics Analysis of Viruses Associated with Cassava Brown Streak Disease in Kenya. Viruses 18. https://www.mdpi.com/1999-4915/18/3/395
Gomaa, A.E., and Garcia-Ruiz, H. 2025. Genome-Wide Variation Profile of the Genus Tobamovirus. Viruses 17. https://www.ncbi.nlm.nih.gov/pubmed/41012710
Vasquez-Gutierrez, U., Frias-Trevino, G.A., Aguirre-Uribe, L.A., Ramirez-Barron, S.N., Mendez-Lozano, J., Hernandez-Juarez, A., and Garcia-Ruiz, H. 2025. Nanoparticles and Nanocarriers for Managing Plant Viral Diseases. Plants (Basel) 14, 3118. https://www.ncbi.nlm.nih.gov/pubmed/41157677
Gomaa, A.E., El Mounadi, K., Parperides, E., and Garcia-Ruiz, H. 2024. Cell Fractionation and the Identification of Host Proteins Involved in Plant-Virus Interactions. Pathogens 13, 53. https://www.ncbi.nlm.nih.gov/pubmed/38251360
Anyieni, O.J., El Mounadi, K., Garcia-Ruiz, H., Joyce, M.a., and Akello., O.S. 2024. In-vitro regeneration in maize (Zea mays L.) from mature embrio. Journal of Plant Science and Crop Protection 7, 1-15.
Alex, B.G., Zhang, Z.Y., Lasky, D., Garcia-Ruiz, H., Dewberry, R., Allen, C., Halterman, D., and Rakotondrafara, A.M. 2024. A single phosphorylatable amino acid residue is essential for the recognition of multiple potyviral HCPro effectors by potato Ny(tbr). Mol Plant Pathol 25, e70027. https://www.ncbi.nlm.nih.gov/pubmed/39508202
Obara, J., Mulwa, R., Oyoo, M., Charimbu, M., Runo, S., Garcia-Ruiz, H., Obara, C., and Anyieni, J. 2023. Transgenic Expression of Sugarcane Mosaic Virus VPg in Maize Inbred Line CML444 Confers Resistance to Maize Lethal Necrosis Disease. Journal of Plant Science and Crop Protection 6.
Parperides, E., El Mounadi, K., and Garcia-Ruiz, H. 2023. Induction and suppression of gene silencing in plants by nonviral microbes. Mol Plant Pathol 24, 1347-1356. https://www.ncbi.nlm.nih.gov/pubmed/37438989
Herman, M.A., Aiello, B.R., DeLong, J.D., Garcia-Ruiz, H., Gonzalez, A.L., Hwang, W., McBeth, C., Stojkovic, E.A., Trakselis, M.A., and Yakoby, N. 2022. A Unifying Framework for Understanding Biological Structures and Functions Across Levels of Biological Organization. Integr Comp Biol 61, 2038-2047. https://www.ncbi.nlm.nih.gov/pubmed/34302339
LaTourrette, K., and Garcia-Ruiz, H. 2022. Determinants of Virus Variation, Evolution, and Host Adaptation. Pathogens 11, 1039. https://www.ncbi.nlm.nih.gov/pubmed/36145471
Garcia-Ruiz, H. 2021. Viral Suppressors of Gene Silencing. In Encyclopedia of Virology, D.H.a.Z. Bamford, M. (eds.), ed (Oxford: Academic Press.: Elsevier), pp. 116-122. http://www.sciencedirect.com/science/article/pii/B9780128096338212612
Garcia-Ruiz, H. 2021. Perspectives and applications of omics sciences in plant pathology. Mexican Journal of Phytopathology 39, S14-S15.
Garcia-Ruiz, H., Holste, N.M., and LaTourrette, K. 2021. Poleroviruses (Luteoviridae). In Encyclopedia of Virology, D.H.a.Z. Bamford, M. (eds.), ed (Oxford: Academic Press.: Elsevier), pp. 594-602. http://www.sciencedirect.com/science/article/pii/B9780128096338213435
Garcia-Ruiz, H., and LaTourrette, K. 2021. A genomic vision of covid-19 from plant pathology. Mexican Journal of Phytopathology 39, S25-S27.
Garcia-Ruiz, H., LaTourrette, K., and Garcia-Ruiz, M.T. 2021. Basic Coronavirus biology and vaccines for COVID-19. Revista Mexicana de Fitopatología, Mexican Journal of Phytopathology 39, 1-19.
Garcia-Ruiz, H., Szurek, B., and Van den Ackerveken, G. 2021. Stop helping pathogens: engineering plant susceptibility genes for durable resistance. Curr Opin Biotechnol 70, 187-195. https://www.ncbi.nlm.nih.gov/pubmed/34153774
LaTourrette, K., and Garcia-Ruiz, H. 2021. Virus genomics provides novel insights on nucleic acid and protein structure. Mexican Journal of Phytopathology 39, S22-23.
LaTourrette, K., Holste, N.M., and Garcia-Ruiz, H. 2021. Polerovirus genomic variation. Virus evolution 7, veab102. https://www.ncbi.nlm.nih.gov/pubmed/35299789
LaTourrette, K., Holste, N.M., Rodriguez-Pena, R., Leme, R.A., and Garcia-Ruiz, H. 2021. Genome-Wide Variation in Betacoronaviruses. J Virol 95, e0049621. https://www.ncbi.nlm.nih.gov/pubmed/34037417
Rodriguez-Pena, R., Mounadi, K.E., and Garcia-Ruiz, H. 2021. Changes in Subcellular Localization of Host Proteins Induced by Plant Viruses. Viruses 13. https://www.ncbi.nlm.nih.gov/pubmed/33920930
El-Mounadi, K., Morales-Floriano, M.L., and Garcia-Ruiz, H. 2020. Principles, Applications, and Biosafety of Plant Genome Editing Using CRISPR-Cas9. Frontiers in plant science 11, 56. https://www.ncbi.nlm.nih.gov/pubmed/32117392
Nigam, D., and Garcia-Ruiz, H. 2020. Variation Profile of the Orthotospovirus Genome. Pathogens 9, 521. https://www.ncbi.nlm.nih.gov/pubmed/32610472
Nigam, D., LaTourrette, K., and Garcia-Ruiz, H. 2020. Mutations in virus-derived small RNAs. Sci Rep 10, 9540. https://www.ncbi.nlm.nih.gov/pubmed/32533016
Garcia-Ruiz, H. 2019. When Viruses Infect Plants. Scientia (Bristol) 2019, 40-43. https://www.ncbi.nlm.nih.gov/pubmed/30881697
Garcia-Ruiz, H. 2019. Host factors against plant viruses. Mol Plant Pathol 20, 1588-1601. https://www.ncbi.nlm.nih.gov/pubmed/31286679
Nigam, D., LaTourrette, K., Souza, P.F.N., and Garcia-Ruiz, H. 2019. Genome-Wide Variation in Potyviruses. Frontiers in plant science 10, 1439. https://www.ncbi.nlm.nih.gov/pubmed/31798606
Souza, P.F.N., Garcia-Ruiz, H., and Carvalho, F.E.L. 2019. What proteomics can reveal about plant-virus interactions? Photosynthesis-related proteins on the spotlight. Theor Exp Plant Physiol 31, 227-248. https://www.ncbi.nlm.nih.gov/pubmed/31355128
Garcia Ruiz, M.T., Knapp, A.N., and Garcia-Ruiz, H. 2018. Profile of genetically modified plants authorized in Mexico. GM Crops Food 9, 152-168. https://www.ncbi.nlm.nih.gov/pubmed/30388927
Garcia-Ruiz, H. 2018. Susceptibility Genes to Plant Viruses. Viruses 10, 484. https://www.ncbi.nlm.nih.gov/pubmed/30201857
Garcia-Ruiz, H., Diaz, A., and Ahlquist, P. 2018. Intermolecular RNA Recombination Occurs at Different Frequencies in Alternate Forms of Brome Mosaic Virus RNA Replication Compartments. Viruses 10, 131. https://www.ncbi.nlm.nih.gov/pubmed/29543718
Garcia-Ruiz, H., Gabriel Peralta, S.M., and Harte-Maxwell, P.A. 2018. Tomato Spotted Wilt Virus NSs Protein Supports Infection and Systemic Movement of a Potyvirus and Is a Symptom Determinant. Viruses 10, 129. https://www.ncbi.nlm.nih.gov/pubmed/29538326
Wamaitha, M.J., Nigam, D., Maina, S., Stomeo, F., Wangai, A., Njuguna, J.N., Holton, T.A., Wanjala, B.W., Wamalwa, M., Lucas, T., Djikeng, A., and Garcia-Ruiz, H. 2018. Metagenomic analysis of viruses associated with maize lethal necrosis in Kenya. Virol J 15, 90. https://www.ncbi.nlm.nih.gov/pubmed/29792207
Ornelas-Ocampo, K., Ochoa-Martínez, D.L., Aranda-Ocampo, S., Ramírez-Rojas, S., and García-Ruíz, H. 2017. Variabilidad y síntomas causados por Iris yellow spot virus en Nicotiana benthamiana. Revista Mexicana de Fitopatología, Mexican Journal of Phytopathology 35, 131-140.
Bacheller, N., and Garcia-Ruiz, H. 2016. Identification of RNA silencing suppressors in Maize chlorotic mottle vrus. American Phytopathological Society Abstracts.
Garcia-Ruiz, H., Gabriel-Peralta, S.M., Ocampo Ocampo, T., and Bacheller, N. 2016. Induction and suppression of antiviral RNA silencing by Tomato spotted wilt virus in Arabidopsis. American Society for Virology Abstracts.
Garcia-Ruiz, H., Ruiz, M.T.G., Peralta, S.M.G., Gabriel, C.B.M., and El-Mounadi, K. 2016. Mechanisms, applications, and perspectives of antiviral RNA silencing in plants. Rev Mex Fitopatol 34, 286-307. https://www.ncbi.nlm.nih.gov/pubmed/28890589
Ocampo Ocampo, T., Gabriel Peralta, S.M., Bacheller, N., Uiterwaal, S., Knapp, A., Hennen, A., Ochoa-Martinez, D.L., and Garcia-Ruiz, H. 2016. Antiviral RNA silencing suppression activity of Tomato spotted wilt virus NSs protein. Genet Mol Res 15, gmr.15028625. https://www.ncbi.nlm.nih.gov/pubmed/27323202
Garcia-Ruiz, H., Carbonell, A., Hoyer, J.S., Fahlgren, N., Gilbert, K.B., Takeda, A., Giampetruzzi, A., Garcia Ruiz, M.T., McGinn, M.G., Lowery, N., Martinez Baladejo, M.T., and Carrington, J.C. 2015. Roles and programming of Arabidopsis ARGONAUTE proteins during Turnip mosaic virus infection. PLoS Pathog 11, e1004755. https://www.ncbi.nlm.nih.gov/pubmed/25806948
Zhang, J., Li, J., Garcia-Ruiz, H., Bates, P.D., Mirkov, T.E., and Wang, X. 2014. A stearoyl-acyl carrier protein desaturase, NbSACPD-C, is critical for ovule development in Nicotiana benthamiana. Plant J 80, 489-502. https://www.ncbi.nlm.nih.gov/pubmed/25155407
Carbonell, A., Fahlgren, N., Garcia-Ruiz, H., Gilbert, K.B., Montgomery, T.A., Nguyen, T., Cuperus, J.T., and Carrington, J.C. 2012. Functional analysis of three Arabidopsis ARGONAUTES using slicer-defective mutants. The Plant cell 24, 3613-3629. http://www.ncbi.nlm.nih.gov/pubmed/23023169
Lowery, N., Garcia-Ruiz, H., and Carrington, J.C. 2012. Role of Arabidopsis thaliana RNA-dependent RNA polymerase 3, 4 and 5 in antiviral defense. The Catalyst 6, 2.
Brempelis, K., Carrington, J.C., Garcia-Ruiz, H., and Kasschau, K.D. 2010. Establishment of a system to replicate, purify and use a mutant RNA virus to study the antiviral defense response in plants. The OSU Catalyst 4, 4-5.
Cuperus, J.T., Carbonell, A., Fahlgren, N., Garcia-Ruiz, H., Burke, R.T., Takeda, A., Sullivan, C.M., Gilbert, S.D., Montgomery, T.A., and Carrington, J.C. 2010. Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis. Nat Struct Mol Biol 17, 997-1003.https://www.ncbi.nlm.nih.gov/pubmed/20562854
Garcia-Ruiz, H., Takeda, A., Chapman, E.J., Sullivan, C.M., Fahlgren, N., Brempelis, K.J., and Carrington, J.C. 2010. Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip Mosaic Virus infection. Plant Cell 22, 481-496. https://www.ncbi.nlm.nih.gov/pubmed/20190077
Garcia-Ruiz, H., and Ahlquist, P. 2006. Inducible yeast system for Viral RNA recombination reveals requirement for an RNA replication signal on both parental RNAs. J Virol 80, 8316-8328. https://www.ncbi.nlm.nih.gov/pubmed/16912283
Grdzelishvili, V.Z., Garcia-Ruiz, H., Watanabe, T., and Ahlquist, P. 2005. Mutual interference between genomic RNA replication and subgenomic mRNA transcription in brome mosaic virus. J Virol 79, 1438-1451. https://www.ncbi.nlm.nih.gov/pubmed/15650170
Garcia-Ruiz, H., and Murphy, J.F. 2001. Age-related Resistance in Bell Pepper to Cucumber mosaic virus. Annals of Applied Biology 139, 307-317.https://doi.org/10.1111/j.1744-7348.2001.tb00144.x